software-list
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| software-list [2023/04/05 11:43] – joebathelt | software-list [2023/04/21 09:45] (current) – jonas | ||
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| ===== Containerised environments ===== | ===== Containerised environments ===== | ||
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| + | [Contributed by Joe Bathelt] | ||
| Let's dive into the fascinating world of containers! Are you tired of dealing with version conflicts and complicated installations of different software packages on your high-performance computer cluster (HPC)? Say no more! Containers provide an easy and self-contained environment for your analysis. They allow you to use any software without the need for systems administrators to install it on the HPC. With containers, you can run complex data analyses on large datasets that would take weeks on a desktop computer, in just a matter of hours! | Let's dive into the fascinating world of containers! Are you tired of dealing with version conflicts and complicated installations of different software packages on your high-performance computer cluster (HPC)? Say no more! Containers provide an easy and self-contained environment for your analysis. They allow you to use any software without the need for systems administrators to install it on the HPC. With containers, you can run complex data analyses on large datasets that would take weeks on a desktop computer, in just a matter of hours! | ||
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| - | Please note that you need admin rights to build the container. This cannot be done by regular users on the HPC. If you have a Mac or Windows PC, you can install a virtual machine with Linux and build the container there. Ensure that your local version of Singularity is the same as the one on the cluster, i.e. Version 2.6 | + | Please note that you need admin rights to build the container. This cannot be done by regular users on the HPC; please contact Steve Hammett or Jonas Larsson for assistance. If you have a Mac or Windows PC, you can install a virtual machine with Linux and build the container there. Ensure that your local version of Singularity is the same as the one on the cluster, i.e. Version 2.6 |
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| + | ==== Using your Singularity container ==== | ||
| - | **Using your singularity image**: | ||
| There are different ways to use your singularity container. I divided this by use case here: | There are different ways to use your singularity container. I divided this by use case here: | ||
software-list.1680695017.txt.gz · Last modified: 2023/04/05 11:43 by joebathelt