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====== CLUSTER MANUAL ======


====== Softwares on psychp01 ======
Psychp01 is a Linux based platform and has a variety of softwares installed on it. The software suite installed on the cluster is continuously evolving according to user needs and requirements. If an user needs a particular software for a study, the user is encouraged to get in touch with the IT team or Gabriele Bellucci at the earliest convenience. They will run a feasibility analysis and install the required software as soon as possible. Following is a list of available software on the cluster at the moment:

  * **MATLAB R2023a** (/usr/local/apps/MATLAB)
  * **GNU Octave 6.2.0** (/usr/share/octave)
  * **Python 2.7** (/usr/bin/python2)
  * **Python 3.11** (/usr/bin/python3)
  * **SPM12** (/usr/local/apps/SPM)
  * **FSl 6.0.7** (/usr/local/apps/fsl_6.0.7)
  * **R 4.0.4** (/usr/bin/R)
  * **mTRF** (/usr/local/apps/mTRF)
  * **Anatomy toolbox** (/usr/local/apps/anatomy)
  * **Fieldtrip** (/usr/local/apps/fieldtrip)
  * **EEG lab** (/usr/local/apps/eeglab)
  * **pyfMRI Quality Control package** (/usr/local/apps/pyfMRIqc)
  * **ASHS: Automatic Segmentation of Hippocampal Subfields package** (/usr/local/apps/ashs)
  * **Freesurfer 7.4.1** (/usr/local/apps/freesurfer)
  * **ITK-SNAP 4.2.2** (/usr/local/apps/itksnap)


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