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Table of Contents
Getting Started with HPC on psychp01 6 First Steps on psychp01 7 Linux QuickStart 9 New on Linux systems? 9 Common Commands 9 Text editing in command line 11 Cluster access 13 VPN connection 13 Log in with SSH 13 GUI access 15 Running analyses on psychp01 17 Transferring files to/from psychp01 18 Transferring data 18 Transferring code 18 File Transfer Clients 18 Bash files and Batch system 23 Dos and don'ts 23 Batch System 23 Creating a job script 23 How to pass command-line parameters to the job script 24 Software on psychp01 25 Advanced SLURM 26 Running jobs 31 Job Blueprint 32 R example 35 Python example 36 MATLAB example 37 Interactive Jobs 40 Starting an interactive job 40 Keeping interactive jobs alive 40 Installing VPN Client – GlobalProtect 42 Frequently Asked Questions 46