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cluster-softwares

CLUSTER MANUAL

Softwares on psychp01

Psychp01 is a Linux based platform and has a variety of softwares installed on it. The software suite installed on the cluster is continuously evolving according to user needs and requirements. If an user needs a particular software for a study, the user is encouraged to get in touch with the IT team or Gabriele Bellucci at the earliest convenience. They will run a feasibility analysis and install the required software as soon as possible. Following is a list of available software on the cluster at the moment:

  • MATLAB R2023a (/usr/local/apps/MATLAB)
  • GNU Octave 6.2.0 (/usr/share/octave)
  • Python 2.7 (/usr/bin/python2)
  • Python 3.11 (/usr/bin/python3)
  • SPM12 (/usr/local/apps/SPM)
  • FSl 6.0.7 (/usr/local/apps/fsl_6.0.7)
  • R 4.0.4 (/usr/bin/R)
  • mTRF (/usr/local/apps/mTRF)
  • Anatomy toolbox (/usr/local/apps/anatomy)
  • Fieldtrip (/usr/local/apps/fieldtrip)
  • EEG lab (/usr/local/apps/eeglab)
  • pyfMRI Quality Control package (/usr/local/apps/pyfMRIqc)
  • ASHS: Automatic Segmentation of Hippocampal Subfields package (/usr/local/apps/ashs)

Bash files and Batch systemAdvanced SLURM
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cluster-softwares.txt · Last modified: 2024/11/27 15:01 by gabriele

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